BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B10LP1|AL425485
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1459 1864 0.0
>3x_Contig1459
Length = 6711
Score = 1864 bits (939), Expect = 0.0
Identities = 951/955 (99%), Gaps = 1/955 (0%)
Strand = Plus / Minus
Query: 1 gatcagaagattcagtagactaatggctctaagcattttcatcctttctgtcatatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 gatcagaagattcagtagactaatggctctaagcattttcatcctttctgtcatatcaat 1385
Query: 61 cgtccacctccctctccatccatcatcccagactctctttctaaaagtcgccaaatcgtt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1384 cgtccacctccctctccatccatcatcccagactctctttttaaaagtcgccaaatcgtt 1325
Query: 121 atacattgtccattagatctaggagctatttttggtacaattttcccacagctatttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 atacattgtccattagatctaggagctatttttggtacaattttcccacagctatttcat 1265
Query: 181 tattacaagatatcaacaggcaagcacaacccagctttgatgtttgttaattgccttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 tattacaagatatcaacaggcaagcacaacccagctttgatgtttgttaattgccttttt 1205
Query: 241 ttctcgcccctcacggtaccttgcattagatttggacaatgaacgaaaaatataaaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 ttctcgcccctcacggtaccttgcattagatttggacaatgaacgaaaaatataaaactg 1145
Query: 301 aaaaattagacaatgcggacgagaaatgggagacctggctaaaaaggggaaaaatcagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 aaaaattagacaatgcggacgagaaatgggagacctggctaaaaaggggaaaaatcagaa 1085
Query: 361 cagaaaatagtaattaaccagatatcctgtacgtatagcttatccgtagctttcgcatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 cagaaaatagtaattaaccagatatcctgtacgtatagcttatccgtagctttcgcatac 1025
Query: 421 acatggagtttagaagatgcctttgccatttgcttgtgtgcggaactttcttagtatttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 acatggagtttagaagatgcctttgccatttgcttgtgtgcggaactttcttagtatttc 965
Query: 481 atgcttttcttatcaagtctttttccctatttggctgtcttgcctcaattctctacgccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 atgcttttcttatcaagtctttttccctatttggctgtcttgcctcaattctctacgccg 905
Query: 541 tttccgtggtttccgttttcgggaataagaaaaaaataaaaagtttcccaaagggtacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tttccgtggtttccgttttcgggaataagaaaaaaataaaaagtttcccaaagggtacat 845
Query: 601 gcagggcaactttcgtgttccgtctgagcatagtgaaaagaaaaaacaatttggccaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gcagggcaactttcgtgttccgtctgagcatagtgaaaagaaaaaacaatttggccaatt 785
Query: 661 ttcttcaagtatattttttgccttttttctgattattggctgcgtcaacaagamgtgcat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 784 ttcttcaagtatattttttgccttttttctgattattggctgcgtcaacaagacgtgcat 725
Query: 721 tgaattggtgc-actgaacgtggcactgggtattactcagaattaacggagcggaaaatt 779
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tgaattggtgcaactgaacgtggcactgggtattactcagaattaacggagcggaaaatt 665
Query: 780 agattcggatttttaatcttactaattttatcctcattcctaggttttcattgtgatatt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 agattcggatttttaatcttactaattttatcctcattcctaggttttcattgtgatatt 605
Query: 840 ggcttttcacatccgttttttagtcgctggtaccgctcactgcggttattcacagttata 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ggcttttcacatccgttttttagtcgctggtaccgctcactgcggttattcacagttata 545
Query: 900 cagatctaaaatcttgcaaggacacggwactacaatgctgttttgacgcgtcccc 954
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 544 cagatctaaaatcttgcaaggacacggaactacaatgctgttttgacgcgtcccc 490
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8126
Number of Sequences: 1807
Number of extensions: 8126
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)